Thursday, December 8, 2016
New version 3.2.1_12082016
An updated version has been posted: 3.2.1_12082016. This version adds de-duplication of scaffolds (removal of redundant scaffolds from the assembly) as final step. If you need to run the de-duplication manually you can do so by running "bin/deduplicate_contigs.sh <CA assembly folder name> genome <NUM_THREADS>" .
Posted by Aleksey Zimin at 5:07 PM